Index

B

backmap.backmap module backmap.cli module

backmap.local_colormaps module backmap.utils module bytecheck() (in module backmap.utils)

C

calculate_dihedral_angle() (in module backmap.utils) check_pdb() (in module backmap.utils)

cmap_ranges (in module backmap.local_colormaps) cmaps (in module backmap.local_colormaps)

D

display_cmaps() (in module backmap.local_colormaps) draw_figures() (in module backmap.backmap) draw_per_model_histogram() (in module backmap.backmap)

draw_per_residue_plot() (in module backmap.backmap) draw_per_residue_RMSD() (in module backmap.backmap) draw_per_residue_RMSF() (in module backmap.backmap) draw_xyz() (in module backmap.backmap)

F

fill_in_missing_resids() (in module backmap.backmap)

forceAspect() (in module backmap.utils)

G

get_coord_by_key_value_match() (in module backmap.utils) get_filename_and_filehandle() (in module backmap.utils)

get_pdb_filenames() (in module backmap.utils) get_pdbfn_name_and_dir() (in module backmap.backmap)

I

is_filehandle() (in module backmap.utils)

M

main() (in module backmap.cli) mark_figure() (in module backmap.backmap) median_filter() (in module backmap.utils) module backmap.backmap backmap.cli backmap.local_colormaps backmap.utils

N

normalized_ramachandran_number() (in module backmap.backmap)

O

obtain_ramachandran_dataframe() (in module backmap.backmap)

P

parse_PDB_lines() (in module backmap.utils)

process_PDB() (in module backmap.backmap)

R

R() (in module backmap.backmap) r() (in module backmap.backmap) ramachandran_number() (in module backmap.backmap) read_pdb() (in module backmap.utils) read_pdb_from_pdbfn_or_filehandle() (in module backmap.backmap)

read_pdb_inhouse() (in module backmap.utils) return_filehandle_from_gz_zip_or_normal_file() (in module backmap.utils) return_gz_filehandle() (in module backmap.utils) return_normal_filehandle() (in module backmap.utils) return_tgz_filehandle() (in module backmap.utils) return_zip_file_handle() (in module backmap.utils)

W

write_image() (in module backmap.backmap)